Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015818368.1_cds_XP_016499590.1_13500
CDS Infomation

[gene=LOC107818162] [db_xref=GeneID:107818162] [protein=protein IQ-DOMAIN 31-like isoform X3] [protein_id=XP_016499590.1] [location=complement(join(1444..1472,2010..3093,3995..4075,5115..5318,5936..6205,7380..7454))] [gbkey=CDS]
Sequence

ATGGGGAAGTCTCCGGGAAAATGGATCAAGGCTGTGCTTTTTGGGAAAAAGTCATCCAAG
TCTAGTTTCACAAAGGACATCAGCGGTGAGAAAAGGTTTGTGACAAAGGCATTTGCGGGG
GATCTTGCCCCTAATCCACCAATCCAGAATGTTGATAGGGGTTCTGAGACTGCAGTGGAG
AAGGGAACAAGTATTGGCATCACATGTGATAGTGCTGCTTTATCCTCTGTGATACAAGAT
ATAGAGTCACAAGTTACAAATGGAGCACTTTCAGCTGATGATGCGGAGTTAAAACGGCTA
GAGCAAGCTGCAACAAAAGCACAAGCAGCCTTTAGGGGTTACTTGGCTCGTCGGGCATTT
CGAGCGCTTAAAGGCATTATACGGCTGCAAGCTCTTGTTCGTGGGCACTTGGTAAGGAGG
CAGGCAGTTGCTACTCTACGGTGCATGCGAGCAATTGTTAGTGTTCAGGCATTAGCTCGT
GGTCAAAGGGCTAGACTTTCAGATCCCACCCATCAAGTCCTTAGGAGGTACAATTACGGA
GAACATAAGGATGCTAAGCAGGTGGATTTAACTGTTGTAAGCATGTCTGTTAGGCCAGAA
AAGCTAACAGCTAGTGCATTTGTTTGCAAGCTTCTTGCTGCAGTGCCAATCGCCATGCCC
TTGAGCCTTCAGTATGATGAGTGTGAACCTAATTCAGTTCGGCAGTGGCTTGAGCGCTGG
TCGCTATCTCGCTTTTGGGAACCACTTCCACAAGCGAAGAAAGTTGTTGACACAAAGTCA
CAGAAAAAACAAGCCAGCGGACAGAGTGTTGGGACAGAAGTAGTAAGATCAAAACGGAGT
GTCAGGAAGGTTCTTTCAGCAGCAACTGGTGATGTTAGTACTGTAAGTTCTTCTGATCCT
GAAAAACCCAGGCGTAACATAAGGAAAACCACAACTCATCAGATAGAATCAGTGCAAGAT
CAACCTCAAAATGAACTTGAGAGGGTCAAACGGAATCTAATAAGAGTTACTGCAGCTGTG
GCAACACCTCCAGAAAAGTCAGATGCAGAAACTGATAAGGCACGACAGATTCCTATTCCA
GCTCAAGCTCAGGCAAAAACCTCAATATCCTCAGCTTCTAATGTTGGTGAAGTACTGGTG
GTTAATTCTCCTGAGAAAACGAGTGATTCAATTTCTGAAATTGACAAGTTAGCTTTGACT
AAAGCTCCTATCAGTGATTCAATTTCTGAAATTGACAACTTAGCTTTGACTGAAGCTCCT
ATGCAAGTAGCTGGGGAGGAACCAACTGATGTGTTGCATGATCATCCTACAGTTGAGCAA
CAGCAATTACAAGAGGAAAATGTTGGTAAAAGCAAGAACAGTCCAATTGTTAATGAGGAG
CTTAGCTCCAAAGAAGATCAAACTAGTAAAGAGAGAACTAGGAGGAGGAGATCTCTTCCA
TCAAAGGAAGAGAACTCCGAGAATATCTCTCAAAATACACCAAGTGTGCCCAGCTATATG
GAATCAACTCAATCTGCAAAGGCGAAGCTTAAAACACAAGGGTCTCCTAAGGTAAGTGAA
GATGGAGCTGAAAATGTTGTTGTCCGGCGTCATTCTCTACCATCCTCTACCAATGGAAAA
ATCAGCTCATTGTCTCCTCGGGTGCAAAGGCCCGTTCAAGCAAATGGAATAAGTGGAAAC
AAGAACAACAGATCAATGCCAGCTTCTAGAGATGAATTGTATGGATATAGAGGACATATA
TAA

Peptide Sequence

PEP ID

XP_016499590.1
PEP Infomation

PREDICTED: protein IQ-DOMAIN 31-like isoform X3 [Nicotiana tabacum]
Sequence

MGKSPGKWIKAVLFGKKSSKSSFTKDISGEKRFVTKAFAGDLAPNPPIQNVDRGSETAVE
KGTSIGITCDSAALSSVIQDIESQVTNGALSADDAELKRLEQAATKAQAAFRGYLARRAF
RALKGIIRLQALVRGHLVRRQAVATLRCMRAIVSVQALARGQRARLSDPTHQVLRRYNYG
EHKDAKQVDLTVVSMSVRPEKLTASAFVCKLLAAVPIAMPLSLQYDECEPNSVRQWLERW
SLSRFWEPLPQAKKVVDTKSQKKQASGQSVGTEVVRSKRSVRKVLSAATGDVSTVSSSDP
EKPRRNIRKTTTHQIESVQDQPQNELERVKRNLIRVTAAVATPPEKSDAETDKARQIPIP
AQAQAKTSISSASNVGEVLVVNSPEKTSDSISEIDKLALTKAPISDSISEIDNLALTEAP
MQVAGEEPTDVLHDHPTVEQQQLQEENVGKSKNSPIVNEELSSKEDQTSKERTRRRRSLP
SKEENSENISQNTPSVPSYMESTQSAKAKLKTQGSPKVSEDGAENVVVRRHSLPSSTNGK
ISSLSPRVQRPVQANGISGNKNNRSMPASRDELYGYRGHI

Transcript Sequence

Gene sequence data has not been registered.